Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | DU508_02690 | Not Available | Negative | 628149 - 628571 | 15660.2 |
| hypothetical protein | DU508_02695 | Not Available | Positive | 628714 - 634299 | 207472.0 |
| penicillin-binding protein 1c | DU508_02700 | Not Available | Positive | 634590 - 636971 | 89174.4 |
| lysoplasmalogenase | DU508_02705 | Not Available | Negative | 636978 - 637670 | 26165.0 |
| sterol desaturase family protein | DU508_02710 | Not Available | Negative | 637660 - 638877 | 47429.7 |
| response regulator | DU508_02715 | Not Available | Positive | 639298 - 639681 | 14156.5 |
| heat repeat domain-containing protein | DU508_02720 | Not Available | Positive | 639703 - 640872 | 44955.9 |
| glycosyltransferase family 2 protein | DU508_02725 | Not Available | Positive | 640859 - 642325 | 56404.3 |
| yaio family outer membrane beta-barrel protein | DU508_02730 | Not Available | Positive | 642306 - 644219 | 73711.8 |
| duf4838 domain-containing protein | DU508_02735 | Not Available | Positive | 644226 - 646466 | 86168.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

