Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DU508_02640 | Not Available | Negative | 613925 - 615637 | 64096.0 |
| tonb-dependent receptor | DU508_02645 | Not Available | Negative | 615642 - 618821 | 116507.0 |
| laci family transcriptional regulator | DU508_02650 | Not Available | Positive | 619291 - 620307 | 38317.0 |
| mfs transporter | DU508_02655 | Not Available | Negative | 620304 - 621533 | 44873.9 |
| marr family transcriptional regulator | DU508_02660 | Not Available | Positive | 621703 - 622146 | 16959.8 |
| mbl fold metallo-hydrolase | DU508_02665 | Not Available | Positive | 622194 - 623030 | 31522.5 |
| aquaporin z | DU508_02670 | Not Available | Positive | 623325 - 624032 | 23993.6 |
| glutathione peroxidase | DU508_02675 | Not Available | Negative | 624107 - 624619 | 19364.5 |
| type i dna topoisomerase | DU508_02680 | Not Available | Positive | 625009 - 627570 | 96010.6 |
| hypothetical protein | DU508_02685 | Not Available | Positive | 627659 - 628063 | 15030.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

