Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chitinase | DU508_02590 | Not Available | Negative | 594890 - 595954 | 40591.4 |
| glucuronyl hydrolase | DU508_02595 | Not Available | Negative | 596103 - 597275 | 44330.6 |
| alginate lyase | DU508_02600 | Not Available | Negative | 597277 - 598461 | 45015.4 |
| glycoside hydrolase family 2 protein | DU508_02605 | Not Available | Negative | 598463 - 600925 | 93604.1 |
| duf4982 domain-containing protein | DU508_02610 | Not Available | Negative | 600930 - 603614 | 101253.0 |
| glycosyl hydrolase | DU508_02615 | Not Available | Negative | 603819 - 606041 | 81717.4 |
| endo-1,4-beta-xylanase | DU508_02620 | Not Available | Negative | 606055 - 607140 | 40240.9 |
| beta-glucuronidase | DU508_02625 | Not Available | Negative | 607142 - 608971 | 70435.6 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_02630 | Not Available | Negative | 609079 - 610800 | 64110.2 |
| tonb-dependent receptor | DU508_02635 | Not Available | Negative | 610812 - 613934 | 113592.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

