Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | DU508_02540 | Not Available | Negative | 581252 - 582022 | 29458.9 |
| glycosyltransferase | DU508_02545 | Not Available | Positive | 582161 - 584431 | 85675.7 |
| glycosidase | DU508_02550 | Not Available | Negative | 585373 - 586845 | 56518.0 |
| sensor histidine kinase | DU508_02555 | Not Available | Positive | 586996 - 588159 | 43277.5 |
| metallophosphoesterase | DU508_02560 | Not Available | Negative | 588199 - 589284 | 41814.9 |
| duf4185 domain-containing protein | DU508_02565 | Not Available | Positive | 589549 - 590706 | 43560.7 |
| hypothetical protein | DU508_02570 | Not Available | Negative | 590708 - 590941 | 8874.07 |
| mannonate dehydratase | DU508_02575 | Not Available | Negative | 591196 - 592371 | 44144.5 |
| sdr family nad(p)-dependent oxidoreductase | DU508_02580 | Not Available | Negative | 592375 - 593199 | 29272.2 |
| glycosyl hydrolase | DU508_02585 | Not Available | Negative | 593221 - 594696 | 55094.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

