Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DU508_02440 | Not Available | Positive | 555267 - 558398 | 113434.0 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_02445 | Not Available | Positive | 558416 - 559507 | 39894.3 |
| hypothetical protein | DU508_02450 | Not Available | Negative | 560140 - 560373 | 9130.36 |
| hypothetical protein | DU508_02455 | Not Available | Positive | 561030 - 561242 | 8519.76 |
| dihydrofolate reductase | DU508_02460 | Not Available | Negative | 561274 - 561867 | 21838.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_02465 | Not Available | Negative | 562158 - 563591 | 53055.3 |
| susc/raga family tonb-linked outer membrane protein | DU508_02470 | Not Available | Negative | 563602 - 566775 | 114664.0 |
| tlpa family protein disulfide reductase | DU508_02475 | Not Available | Positive | 567372 - 568637 | 46889.4 |
| cdgsh iron-sulfur domain-containing protein | DU508_02480 | Not Available | Positive | 568779 - 569003 | 8145.75 |
| ribulokinase | DU508_02485 | Not Available | Positive | 569159 - 570859 | 61865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

