Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_23620 | Not Available | Negative | 5435177 - 5435356 | 6257.73 |
| copper chaperone | DU508_23625 | Not Available | Negative | 5435621 - 5435842 | 8062.61 |
| hypothetical protein | DU508_23645 | Not Available | Positive | 5440886 - 5441188 | 11322.8 |
| Trna-ala | Not Available | Not Available | Positive | 5441159 - 5441235 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5441302 - 5441379 | Not Available |
| rhs repeat-associated core domain-containing protein | DU508_23665 | Not Available | Positive | 5443452 - 5444798 | 49822.6 |
| hypothetical protein | DU508_23670 | Not Available | Positive | 5444795 - 5445073 | 10763.8 |
| hypothetical protein | DU508_23675 | Not Available | Negative | 5445093 - 5445470 | 14200.3 |
| is256 family transposase | DU508_23680 | Not Available | Negative | 5445613 - 5446833 | 47074.7 |
| hypothetical protein | DU508_23685 | Not Available | Positive | 5446965 - 5447267 | 11325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

