Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone | DU508_23570 | Not Available | Negative | 5423848 - 5424234 | 14208.7 |
| heavy metal translocating p-type atpase | DU508_23575 | Not Available | Negative | 5424268 - 5426664 | 85372.6 |
| copper oxidase | DU508_23580 | Not Available | Negative | 5427145 - 5429418 | 87047.8 |
| cytochrome c | DU508_23585 | Not Available | Negative | 5429432 - 5429887 | 17411.2 |
| hypothetical protein | DU508_23590 | Not Available | Negative | 5429920 - 5430339 | 15468.3 |
| duf305 domain-containing protein | DU508_23595 | Not Available | Negative | 5430366 - 5430890 | 19987.8 |
| duf3347 domain-containing protein | DU508_23600 | Not Available | Negative | 5430902 - 5431567 | 24016.2 |
| heavy metal translocating p-type atpase | DU508_23605 | Not Available | Negative | 5431574 - 5433694 | 75745.4 |
| phosphoribosylpyrophosphate synthetase | DU508_23610 | Not Available | Negative | 5433713 - 5434018 | 11441.5 |
| duf3347 domain-containing protein | DU508_23615 | Not Available | Negative | 5434033 - 5434908 | 31678.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

