Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mercuric transport protein mertp | DU508_23515 | Not Available | Positive | 5410947 - 5411549 | 21955.3 |
| hypothetical protein | DU508_23520 | Not Available | Positive | 5411549 - 5411758 | 7939.59 |
| hypothetical protein | DU508_23525 | Not Available | Positive | 5411828 - 5412166 | 12822.8 |
| transcriptional repressor | DU508_23530 | Not Available | Positive | 5412173 - 5412583 | 15527.0 |
| cusa/czca family heavy metal efflux rnd transporter | DU508_23535 | Not Available | Positive | 5413116 - 5417483 | 160670.0 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_23540 | Not Available | Positive | 5417490 - 5418761 | 46405.2 |
| cadmium-translocating p-type atpase | DU508_23545 | Not Available | Positive | 5418779 - 5420824 | 73987.2 |
| hypothetical protein | DU508_23550 | Not Available | Negative | 5420882 - 5421070 | 7561.65 |
| tetracycline regulation of excision, rtec | DU508_23555 | Not Available | Positive | 5421160 - 5421984 | 33083.8 |
| arac family transcriptional regulator | DU508_23560 | Not Available | Positive | 5422100 - 5422663 | 21627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

