Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein | DU508_23460 | Not Available | Negative | 5398563 - 5399621 | 41633.8 |
| urocanate hydratase | DU508_23465 | Not Available | Negative | 5399891 - 5401561 | 61008.2 |
| hypothetical protein | DU508_23470 | Not Available | Positive | 5401629 - 5401961 | 12416.3 |
| tonb-dependent receptor | DU508_23475 | Not Available | Positive | 5402086 - 5404404 | 85367.9 |
| hypothetical protein | DU508_23480 | Not Available | Negative | 5404966 - 5405169 | 7005.95 |
| hypothetical protein | DU508_23490 | Not Available | Negative | 5406138 - 5406497 | 13264.4 |
| hypothetical protein | DU508_23495 | Not Available | Positive | 5406599 - 5407030 | 16867.6 |
| relaxase | DU508_23500 | Not Available | Positive | 5407038 - 5408324 | 48525.8 |
| conjugal transfer protein trag | DU508_23505 | Not Available | Positive | 5408426 - 5410426 | 76118.9 |
| arsr family transcriptional regulator | DU508_23510 | Not Available | Positive | 5410576 - 5410953 | 14796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

