Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_23410 | Not Available | Negative | 5389734 - 5390918 | 45920.1 |
| xre family transcriptional regulator | DU508_23415 | Not Available | Positive | 5391028 - 5391675 | 24593.5 |
| hypothetical protein | DU508_23420 | Not Available | Positive | 5391966 - 5392181 | 8147.14 |
| hypothetical protein | DU508_23425 | Not Available | Positive | 5392190 - 5392405 | 8413.31 |
| stage ii sporulation protein m | DU508_23430 | Not Available | Positive | 5392383 - 5393336 | 36316.7 |
| hypothetical protein | DU508_23435 | Not Available | Positive | 5393338 - 5394222 | 33697.2 |
| duf4129 domain-containing protein | DU508_23440 | Not Available | Positive | 5394224 - 5394952 | 28681.7 |
| duf4350 domain-containing protein | DU508_23445 | Not Available | Positive | 5394949 - 5396139 | 45722.7 |
| moxr family atpase | DU508_23450 | Not Available | Positive | 5396120 - 5397097 | 36281.1 |
| duf58 domain-containing protein | DU508_23455 | Not Available | Positive | 5397151 - 5398497 | 51601.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

