Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DU508_23360 | Not Available | Positive | 5378842 - 5380209 | 52053.5 |
| terc family protein | DU508_23365 | Not Available | Positive | 5380571 - 5381347 | 28465.8 |
| hypothetical protein | DU508_23370 | Not Available | Negative | 5381477 - 5382367 | 33905.3 |
| mfs transporter | DU508_23375 | Not Available | Positive | 5382505 - 5384025 | 55801.2 |
| hypothetical protein | DU508_23380 | Not Available | Positive | 5384037 - 5384288 | 9479.91 |
| transcription elongation factor greab | DU508_23385 | Not Available | Positive | 5385181 - 5385567 | 14357.7 |
| glucose-1-phosphate thymidylyltransferase | DU508_23390 | Not Available | Negative | 5386068 - 5386928 | 31238.1 |
| dtdp-4-dehydrorhamnose reductase | DU508_23395 | Not Available | Negative | 5387024 - 5387893 | 31519.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DU508_23400 | Not Available | Negative | 5387883 - 5388431 | 20552.3 |
| dtdp-glucose 4,6-dehydratase | DU508_23405 | Not Available | Negative | 5388431 - 5389483 | 39927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

