Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_23310 | Not Available | Negative | 5363251 - 5365632 | 88613.8 |
| nadr | DU508_23315 | Not Available | Negative | 5366288 - 5366815 | 20357.4 |
| nicotinamide riboside transporter pnuc | DU508_23320 | Not Available | Negative | 5366799 - 5367416 | 24218.9 |
| carboxypeptidase regulatory-like domain-containing protein | DU508_23325 | Not Available | Positive | 5367877 - 5368194 | 11186.7 |
| carbamoyl-phosphate synthase large subunit | DU508_23330 | Not Available | Positive | 5368403 - 5371240 | 104941.0 |
| hypothetical protein | DU508_23335 | Not Available | Positive | 5371369 - 5373564 | 82606.2 |
| peptidase s41 | DU508_23340 | Not Available | Negative | 5373634 - 5375940 | 86827.6 |
| sigma-70 family rna polymerase sigma factor | DU508_23345 | Not Available | Positive | 5376110 - 5376670 | 21942.3 |
| hypothetical protein | DU508_23350 | Not Available | Positive | 5376717 - 5377208 | 18633.7 |
| hypothetical protein | DU508_23355 | Not Available | Positive | 5377387 - 5378637 | 44846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

