Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | DU508_02240 | Not Available | Negative | 517069 - 517353 | 10996.5 |
| hypothetical protein | DU508_02245 | Not Available | Negative | 517632 - 518108 | 18472.2 |
| hypothetical protein | DU508_02250 | Not Available | Negative | 518116 - 518319 | 7654.4 |
| acyl-coa thioesterase | DU508_02255 | Not Available | Positive | 518433 - 518852 | 16290.7 |
| lactate utilization protein b/c | DU508_02260 | Not Available | Negative | 519193 - 519783 | 21721.0 |
| lactate utilization protein | DU508_02265 | Not Available | Negative | 519895 - 521265 | 51435.0 |
| (fe-s)-binding protein | DU508_02270 | Not Available | Negative | 521267 - 522001 | 27327.1 |
| galactose mutarotase | DU508_02275 | Not Available | Negative | 522188 - 523339 | 42070.6 |
| nudix domain-containing protein | DU508_02285 | Not Available | Positive | 524299 - 524997 | 27006.8 |
| Trna-lys | Not Available | Not Available | Positive | 525162 - 525237 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

