Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein d | DU508_23210 | Not Available | Positive | 5344566 - 5345432 | 32410.8 |
| hypothetical protein | DU508_23215 | Not Available | Positive | 5345506 - 5345838 | 12980.5 |
| hypothetical protein | DU508_23220 | Not Available | Positive | 5345850 - 5346155 | 11421.8 |
| hypothetical protein | DU508_23225 | Not Available | Positive | 5346152 - 5346724 | 22124.6 |
| duf4868 domain-containing protein | DU508_23230 | Not Available | Positive | 5346728 - 5347687 | 36451.5 |
| duf3883 domain-containing protein | DU508_23235 | Not Available | Positive | 5347754 - 5348530 | 29895.6 |
| atp-binding protein | DU508_23240 | Not Available | Positive | 5348540 - 5349997 | 55903.9 |
| hypothetical protein | DU508_23245 | Not Available | Positive | 5349994 - 5352834 | 108302.0 |
| pd-(d/e)xk motif protein | DU508_23250 | Not Available | Positive | 5352838 - 5353803 | 37181.7 |
| hypothetical protein | DU508_23255 | Not Available | Positive | 5353803 - 5356178 | 92620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

