Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4394 domain-containing protein | DU508_23000 | Not Available | Negative | 5296261 - 5297787 | 52947.8 |
| hypothetical protein | DU508_23005 | Not Available | Negative | 5297838 - 5298158 | 12238.8 |
| atp-dependent clp protease atp-binding subunit | DU508_23010 | Not Available | Positive | 5298785 - 5301334 | 94903.6 |
| is4 family transposase | DU508_23015 | Not Available | Negative | 5301879 - 5303093 | 46340.1 |
| radical sam protein | DU508_23020 | Not Available | Negative | 5303390 - 5304457 | 40439.8 |
| carboxypeptidase-like regulatory domain-containing protein | DU508_23025 | Not Available | Negative | 5304512 - 5305753 | 47244.9 |
| carboxypeptidase-like regulatory domain-containing protein | DU508_23030 | Not Available | Negative | 5305814 - 5307064 | 47898.7 |
| dna repair protein recn | DU508_23035 | Not Available | Negative | 5307188 - 5308840 | 61533.6 |
| peptidase m56 | DU508_23040 | Not Available | Negative | 5308942 - 5311077 | 81698.2 |
| blai/meci/copy family transcriptional regulator | DU508_23045 | Not Available | Negative | 5311161 - 5311532 | 13976.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

