Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_22950 | Not Available | Negative | 5278498 - 5278956 | 17190.1 |
| energy-dependent translational throttle protein etta | DU508_22955 | Not Available | Negative | 5279867 - 5281543 | 62607.5 |
| hypothetical protein | DU508_22960 | Not Available | Negative | 5282001 - 5282228 | 8761.7 |
| helix-turn-helix domain-containing protein | DU508_22965 | Not Available | Negative | 5282218 - 5284944 | 102767.0 |
| mfs transporter | DU508_22970 | Not Available | Positive | 5285304 - 5286638 | 48995.8 |
| carbohydrate kinase | DU508_22975 | Not Available | Positive | 5286640 - 5287530 | 33122.4 |
| tonb-dependent receptor | DU508_22980 | Not Available | Positive | 5287601 - 5290684 | 112653.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_22985 | Not Available | Positive | 5290698 - 5292413 | 64814.3 |
| duf2961 domain-containing protein | DU508_22990 | Not Available | Positive | 5292468 - 5294066 | 60964.9 |
| 2,6-beta-d-fructofuranosidase | DU508_22995 | Not Available | Positive | 5294117 - 5295766 | 62891.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

