Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | DU508_22850 | Not Available | Negative | 5259368 - 5260705 | 50098.5 |
| amino acid permease | DU508_22855 | Not Available | Negative | 5260798 - 5262255 | 51709.4 |
| sodium-translocating pyrophosphatase | DU508_22860 | Not Available | Negative | 5262387 - 5264633 | 78553.6 |
| amino acid permease | DU508_22865 | Not Available | Positive | 5264862 - 5266286 | 51319.6 |
| tigr01212 family radical sam protein | DU508_22870 | Not Available | Positive | 5266570 - 5267517 | 36225.6 |
| ammonium transporter | DU508_22875 | Not Available | Positive | 5267865 - 5269253 | 49435.0 |
| porin | DU508_22880 | Not Available | Positive | 5269291 - 5270310 | 36239.5 |
| duf4468 domain-containing protein | DU508_22885 | Not Available | Positive | 5270328 - 5270972 | 24951.3 |
| hypothetical protein | DU508_22890 | Not Available | Negative | 5270990 - 5271412 | 16232.5 |
| tlpa family protein disulfide reductase | DU508_22895 | Not Available | Negative | 5271490 - 5272017 | 20202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

