Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DU508_22695 | Not Available | Positive | 5217412 - 5218536 | 42678.5 |
| glycosyltransferase | DU508_22700 | Not Available | Positive | 5218540 - 5219682 | 42833.9 |
| t9ss c-terminal target domain-containing protein | DU508_22705 | Not Available | Positive | 5219904 - 5225066 | 186263.0 |
| hypothetical protein | DU508_22710 | Not Available | Negative | 5225341 - 5226225 | 32998.2 |
| gfo/idh/moca family oxidoreductase | DU508_22715 | Not Available | Negative | 5226230 - 5227234 | 37529.1 |
| glycosyltransferase | DU508_22720 | Not Available | Negative | 5227236 - 5227976 | 28428.7 |
| sdr family nad-dependent epimerase/dehydratase | DU508_22725 | Not Available | Negative | 5228265 - 5229254 | 37507.9 |
| gdp-l-fucose synthase | DU508_22730 | Not Available | Negative | 5229362 - 5230306 | 35346.4 |
| gdp-mannose 4,6-dehydratase | DU508_22735 | Not Available | Negative | 5230326 - 5231438 | 42064.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DU508_22745 | Not Available | Negative | 5232873 - 5234801 | 70482.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

