Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | DU508_22595 | Not Available | Positive | 5191347 - 5193200 | 69733.3 |
| gliding motility protein remb | DU508_22600 | Not Available | Positive | 5193206 - 5194819 | 61945.9 |
| duf1972 domain-containing protein | DU508_22605 | Not Available | Positive | 5195466 - 5196623 | 44118.7 |
| serine acetyltransferase | DU508_22610 | Not Available | Positive | 5196620 - 5197186 | 20695.7 |
| hypothetical protein | DU508_22615 | Not Available | Negative | 5197220 - 5198026 | 30442.7 |
| dna-binding response regulator | DU508_22620 | Not Available | Positive | 5198380 - 5199030 | 24148.0 |
| undecaprenyl-phosphate glucose phosphotransferase | DU508_22625 | Not Available | Positive | 5199171 - 5200577 | 54421.9 |
| nad(p)-dependent oxidoreductase | DU508_22630 | Not Available | Negative | 5201174 - 5202517 | 48785.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DU508_22635 | Not Available | Negative | 5202541 - 5203092 | 21104.7 |
| sdr family nad-dependent epimerase/dehydratase | DU508_22640 | Not Available | Negative | 5203103 - 5204191 | 39832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

