Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | DU508_22345 | Not Available | Positive | 5134126 - 5135112 | 36110.2 |
| hypothetical protein | DU508_22350 | Not Available | Positive | 5135528 - 5136166 | 23925.5 |
| nucleotide sugar dehydrogenase | DU508_22355 | Not Available | Positive | 5136276 - 5137559 | 46900.4 |
| gdp-mannose 4,6-dehydratase | DU508_22360 | Not Available | Positive | 5139038 - 5140174 | 43040.7 |
| capsule biosynthesis protein | DU508_22365 | Not Available | Positive | 5140860 - 5143397 | 93504.7 |
| lipopolysaccharide biosynthesis protein | DU508_22370 | Not Available | Positive | 5143423 - 5144529 | 40661.6 |
| hypothetical protein | DU508_22375 | Not Available | Positive | 5144544 - 5145182 | 25082.7 |
| had family phosphatase | DU508_22380 | Not Available | Positive | 5145179 - 5145808 | 23711.7 |
| nucleotidyl transferase | DU508_22385 | Not Available | Positive | 5145801 - 5146529 | 27669.5 |
| hypothetical protein | DU508_22390 | Not Available | Positive | 5146529 - 5146846 | 12094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

