Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | DU508_22240 | Not Available | Negative | 5113659 - 5116466 | 104923.0 |
| hypothetical protein | DU508_22245 | Not Available | Positive | 5116624 - 5117397 | 29063.0 |
| hypothetical protein | DU508_22250 | Not Available | Positive | 5117442 - 5118125 | 24459.5 |
| dna-3-methyladenine glycosylase i | DU508_22255 | Not Available | Negative | 5118297 - 5118884 | 22608.2 |
| carboxymuconolactone decarboxylase family protein | DU508_22265 | Not Available | Negative | 5119343 - 5119684 | 12857.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DU508_22270 | Not Available | Negative | 5119772 - 5120101 | 12178.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DU508_22275 | Not Available | Negative | 5120106 - 5120753 | 25116.0 |
| gdp-l-fucose synthase | DU508_22280 | Not Available | Positive | 5120869 - 5121795 | 34999.9 |
| hydrogen peroxide-inducible genes activator | DU508_22285 | Not Available | Positive | 5121881 - 5122813 | 35171.1 |
| hypothetical protein | DU508_22290 | Not Available | Positive | 5123787 - 5123990 | 7124.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

