Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DU508_02140 | Not Available | Negative | 493276 - 493572 | 10749.2 |
| hypothetical protein | DU508_02145 | Not Available | Negative | 493675 - 494301 | 23757.4 |
| 2-oxo acid dehydrogenase subunit e2 | DU508_02150 | Not Available | Negative | 494379 - 495713 | 48144.7 |
| competence/damage-inducible protein a | DU508_02155 | Not Available | Negative | 495761 - 497014 | 45757.7 |
| lps-assembly protein lptd | DU508_02160 | Not Available | Negative | 497017 - 499674 | 99159.3 |
| n-acetylmuramoyl-l-alanine amidase | DU508_02165 | Not Available | Positive | 499749 - 500612 | 32214.7 |
| n-acetylmuramoyl-l-alanine amidase | DU508_02170 | Not Available | Positive | 500627 - 501403 | 28673.8 |
| mce family protein | DU508_02175 | Not Available | Positive | 501581 - 502534 | 34160.2 |
| ribonuclease z | DU508_02180 | Not Available | Negative | 502743 - 503648 | 34547.5 |
| anti-sigma factor antagonist | DU508_02185 | Not Available | Negative | 503717 - 504094 | 14047.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

