Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capa family protein | DU508_22190 | Not Available | Negative | 5103319 - 5104416 | 40259.1 |
| glycoside hydrolase | DU508_22195 | Not Available | Negative | 5104617 - 5105174 | 20963.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | DU508_22200 | Not Available | Positive | 5105937 - 5106932 | 36978.1 |
| pyruvate dehydrogenase | DU508_22205 | Not Available | Positive | 5106963 - 5108636 | 58466.8 |
| fic family protein | DU508_22210 | Not Available | Positive | 5108836 - 5109966 | 43011.0 |
| hypothetical protein | DU508_22215 | Not Available | Positive | 5110220 - 5110771 | 20544.0 |
| class a beta-lactamase-related serine hydrolase | DU508_22220 | Not Available | Positive | 5110840 - 5112069 | 47051.6 |
| hypothetical protein | DU508_22225 | Not Available | Positive | 5112144 - 5112449 | 10853.0 |
| metal-dependent hydrolase | DU508_22230 | Not Available | Positive | 5112515 - 5113192 | 24842.7 |
| hypothetical protein | DU508_22235 | Not Available | Negative | 5113246 - 5113566 | 11291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

