Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanophycinase | DU508_22140 | Not Available | Positive | 5092699 - 5093574 | 31276.8 |
| asparaginase | DU508_22145 | Not Available | Positive | 5093637 - 5094479 | 30010.2 |
| hypothetical protein | DU508_22150 | Not Available | Positive | 5094509 - 5095192 | 25541.5 |
| tail-specific protease | DU508_22155 | Not Available | Positive | 5095448 - 5097640 | 81369.5 |
| spfh domain-containing protein | DU508_22160 | Not Available | Negative | 5097924 - 5098856 | 34701.1 |
| m13 family peptidase | DU508_22165 | Not Available | Positive | 5099150 - 5101198 | 77482.5 |
| hypothetical protein | DU508_22170 | Not Available | Positive | 5101427 - 5101612 | 6614.21 |
| hypothetical protein | DU508_22175 | Not Available | Negative | 5101647 - 5102015 | 14459.9 |
| xre family transcriptional regulator | DU508_22180 | Not Available | Positive | 5102719 - 5103012 | 11346.0 |
| hypothetical protein | DU508_22185 | Not Available | Negative | 5103134 - 5103316 | 6573.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

