Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_22090 | Not Available | Negative | 5079715 - 5080851 | 43519.1 |
| dipeptide epimerase | DU508_22095 | Not Available | Positive | 5081008 - 5082039 | 38502.8 |
| hypothetical protein | DU508_22100 | Not Available | Negative | 5082017 - 5082214 | 7503.49 |
| rhodanese-like domain-containing protein | DU508_22105 | Not Available | Negative | 5082347 - 5082664 | 11912.2 |
| duf4407 domain-containing protein | DU508_22110 | Not Available | Positive | 5082895 - 5084019 | 42758.2 |
| m61 family peptidase | DU508_22115 | Not Available | Positive | 5084150 - 5085982 | 68278.9 |
| m20/m25/m40 family metallo-hydrolase | DU508_22120 | Not Available | Positive | 5086084 - 5087391 | 47730.9 |
| hypothetical protein | DU508_22125 | Not Available | Negative | 5088299 - 5089000 | 26971.5 |
| pa2169 family four-helix-bundle protein | DU508_22130 | Not Available | Positive | 5089244 - 5089699 | 17089.0 |
| cyanophycin synthetase | DU508_22135 | Not Available | Negative | 5089786 - 5092401 | 96492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

