Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | DU508_21990 | Not Available | Positive | 5058548 - 5059315 | 29009.4 |
| hypothetical protein | DU508_21995 | Not Available | Positive | 5059554 - 5060354 | 28941.2 |
| l,d-transpeptidase | DU508_22000 | Not Available | Negative | 5060351 - 5061886 | 57577.0 |
| atp-binding protein | DU508_22005 | Not Available | Negative | 5061963 - 5063234 | 48765.4 |
| pep-cterm sorting domain-containing protein | DU508_22010 | Not Available | Positive | 5063185 - 5063268 | 3175.27 |
| duf2235 domain-containing protein | DU508_22015 | Not Available | Negative | 5063346 - 5064467 | 42653.1 |
| n-acetylmuramoyl-l-alanine amidase | DU508_22020 | Not Available | Negative | 5064513 - 5065334 | 29610.6 |
| adenylate/guanylate cyclase domain-containing protein | DU508_22025 | Not Available | Negative | 5065689 - 5066717 | 38408.2 |
| hypothetical protein | DU508_22030 | Not Available | Negative | 5066962 - 5067567 | 23394.7 |
| acyltransferase | DU508_22035 | Not Available | Negative | 5067606 - 5068691 | 40708.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

