Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fumarate hydratase | DU508_21890 | Not Available | Positive | 5037986 - 5039383 | 49737.9 |
| hypothetical protein | DU508_21895 | Not Available | Positive | 5039829 - 5040023 | 7494.27 |
| fumarate hydratase | DU508_21900 | Not Available | Positive | 5040155 - 5040580 | 16352.4 |
| s1/p1 nuclease | DU508_21905 | Not Available | Positive | 5040582 - 5041388 | 30670.9 |
| aspartate--trna ligase | DU508_21910 | Not Available | Negative | 5041498 - 5043243 | 66126.2 |
| hypothetical protein | DU508_21915 | Not Available | Negative | 5043409 - 5043813 | 15682.7 |
| tonb-dependent receptor | DU508_21920 | Not Available | Negative | 5043931 - 5046372 | 90949.0 |
| zn-dependent hydrolase | DU508_21925 | Not Available | Negative | 5046774 - 5048453 | 62879.3 |
| n-acetylmuramoyl-l-alanine amidase | DU508_21930 | Not Available | Positive | 5048568 - 5049404 | 30964.9 |
| hypothetical protein | DU508_21935 | Not Available | Positive | 5049385 - 5049570 | 7169.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

