Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_21690 | Not Available | Positive | 4998995 - 4999273 | 10031.4 |
| conjugative transposon protein tram | DU508_21695 | Not Available | Positive | 4999284 - 5000501 | 44545.2 |
| conjugative transposon protein tran | DU508_21700 | Not Available | Positive | 5000506 - 5001375 | 32351.7 |
| atp-binding protein | DU508_21705 | Not Available | Positive | 5001830 - 5003119 | 49335.1 |
| hypothetical protein | DU508_21710 | Not Available | Positive | 5003119 - 5003733 | 23284.8 |
| type iv secretory system conjugative dna transfer family protein | DU508_21715 | Not Available | Positive | 5004121 - 5006163 | 76157.9 |
| hypothetical protein | DU508_21720 | Not Available | Positive | 5006186 - 5006614 | 15574.0 |
| m23 family peptidase | DU508_21725 | Not Available | Positive | 5006614 - 5007090 | 17563.4 |
| duf1738 domain-containing protein | DU508_21730 | Not Available | Positive | 5007126 - 5008523 | 52764.1 |
| duf4099 domain-containing protein | DU508_21735 | Not Available | Positive | 5008541 - 5009317 | 28647.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

