Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4134 domain-containing protein | DU508_21640 | Not Available | Positive | 4991019 - 4991342 | 11984.8 |
| duf4134 domain-containing protein | DU508_21645 | Not Available | Positive | 4991374 - 4991685 | 10664.3 |
| duf4133 domain-containing protein | DU508_21650 | Not Available | Positive | 4991685 - 4991972 | 10541.2 |
| trag family conjugative transposon atpase | DU508_21655 | Not Available | Positive | 4991962 - 4994433 | 93562.3 |
| hypothetical protein | DU508_21660 | Not Available | Positive | 4994438 - 4995103 | 24243.5 |
| hypothetical protein | DU508_21665 | Not Available | Positive | 4995100 - 4995759 | 24213.7 |
| hypothetical protein | DU508_21670 | Not Available | Positive | 4995883 - 4996437 | 20893.6 |
| hypothetical protein | DU508_21675 | Not Available | Positive | 4996440 - 4997219 | 29665.8 |
| plasmid transfer protein | DU508_21680 | Not Available | Positive | 4997223 - 4998350 | 41672.4 |
| conjugative transposon protein trak | DU508_21685 | Not Available | Positive | 4998355 - 4998975 | 23727.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

