Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DU508_21540 | Not Available | Negative | 4975629 - 4976126 | 18246.4 |
| mfs transporter | DU508_21545 | Not Available | Negative | 4976205 - 4977344 | 41470.2 |
| mfs transporter | DU508_21550 | Not Available | Negative | 4977344 - 4978150 | 29556.9 |
| sdr family nad(p)-dependent oxidoreductase | DU508_21555 | Not Available | Negative | 4978095 - 4978937 | 30213.4 |
| flavodoxin | DU508_21560 | Not Available | Negative | 4978949 - 4979509 | 20891.3 |
| aldo/keto reductase | DU508_21565 | Not Available | Negative | 4979613 - 4980596 | 35775.8 |
| nuclear transport factor 2 family protein | DU508_21570 | Not Available | Negative | 4980612 - 4980995 | 14837.7 |
| aldo/keto reductase | DU508_21575 | Not Available | Negative | 4981117 - 4982271 | 42276.8 |
| arac family transcriptional regulator | DU508_21580 | Not Available | Positive | 4982488 - 4983399 | 35193.9 |
| arac family transcriptional regulator | DU508_21585 | Not Available | Negative | 4983441 - 4983608 | 6512.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

