Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4861 domain-containing protein | DU508_21485 | Not Available | Positive | 4966706 - 4967842 | 42627.9 |
| sdr family nad(p)-dependent oxidoreductase | DU508_21490 | Not Available | Positive | 4967865 - 4968632 | 26995.2 |
| carbonic anhydrase | DU508_21495 | Not Available | Negative | 4968967 - 4969593 | 23848.8 |
| nadph-dependent oxidoreductase | DU508_21500 | Not Available | Negative | 4969649 - 4970158 | 19792.6 |
| crp/fnr family transcriptional regulator | DU508_21505 | Not Available | Negative | 4971524 - 4972138 | 23409.3 |
| had family hydrolase | DU508_21510 | Not Available | Positive | 4972218 - 4972913 | 26532.1 |
| chloramphenicol acetyltransferase | DU508_21515 | Not Available | Positive | 4972910 - 4973557 | 24978.6 |
| hypothetical protein | DU508_21520 | Not Available | Positive | 4973592 - 4973798 | 7763.13 |
| Trna-ala | Not Available | Not Available | Positive | 4973891 - 4973967 | Not Available |
| nad(p)-dependent alcohol dehydrogenase | DU508_21530 | Not Available | Negative | 4974274 - 4975329 | 38008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

