Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_21435 | Not Available | Positive | 4949602 - 4949979 | 14003.2 |
| hypothetical protein | DU508_21440 | Not Available | Negative | 4950090 - 4950530 | 15394.9 |
| hybrid sensor histidine kinase/response regulator | DU508_21445 | Not Available | Negative | 4950669 - 4954733 | 153569.0 |
| tonb-dependent receptor | DU508_21450 | Not Available | Positive | 4954975 - 4958139 | 115574.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_21455 | Not Available | Positive | 4958161 - 4960065 | 69491.0 |
| duf5017 domain-containing protein | DU508_21460 | Not Available | Positive | 4960085 - 4961008 | 33117.0 |
| chondroitinase | DU508_21465 | Not Available | Positive | 4961074 - 4963170 | 78369.1 |
| glucuronyl hydrolase | DU508_21470 | Not Available | Positive | 4963201 - 4964388 | 45200.5 |
| duf2264 domain-containing protein | DU508_21475 | Not Available | Positive | 4964455 - 4965681 | 46263.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DU508_21480 | Not Available | Positive | 4965762 - 4966601 | 31286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

