Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_21385 | Not Available | Positive | 4938082 - 4938471 | 14446.1 |
| helix-turn-helix domain-containing protein | DU508_21390 | Not Available | Negative | 4938680 - 4939666 | 37263.9 |
| transcriptional regulator | DU508_21395 | Not Available | Positive | 4939913 - 4940335 | 15953.2 |
| voc family protein | DU508_21400 | Not Available | Positive | 4940332 - 4940748 | 15643.9 |
| duf3887 domain-containing protein | DU508_21405 | Not Available | Positive | 4940958 - 4942274 | 48116.8 |
| pas domain s-box protein | DU508_21410 | Not Available | Positive | 4942380 - 4944989 | 98814.3 |
| yihy/virulence factor brkb family protein | DU508_21415 | Not Available | Positive | 4945091 - 4946068 | 35612.7 |
| yjbq family protein | DU508_21420 | Not Available | Negative | 4946829 - 4947251 | 15866.9 |
| hypothetical protein | DU508_21425 | Not Available | Negative | 4947260 - 4948579 | 48060.4 |
| pa2169 family four-helix-bundle protein | DU508_21430 | Not Available | Positive | 4948839 - 4949300 | 16875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

