Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4965 domain-containing protein | DU508_21335 | Not Available | Positive | 4919437 - 4921881 | 91482.3 |
| tonb-dependent receptor | DU508_21340 | Not Available | Positive | 4921954 - 4925148 | 116639.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_21345 | Not Available | Positive | 4925161 - 4926981 | 68049.6 |
| alpha-1,6-mannanase | DU508_21350 | Not Available | Positive | 4927133 - 4928245 | 42019.4 |
| hypothetical protein | DU508_21355 | Not Available | Positive | 4928254 - 4930431 | 82453.5 |
| glycoside hydrolase family 92 protein | DU508_21360 | Not Available | Positive | 4930542 - 4932809 | 85893.4 |
| rok family protein | DU508_21365 | Not Available | Positive | 4932854 - 4933747 | 32195.6 |
| secretory protein | DU508_21370 | Not Available | Positive | 4933851 - 4934522 | 25545.6 |
| glycoside hydrolase family 92 protein | DU508_21375 | Not Available | Positive | 4934649 - 4936937 | 85838.4 |
| ribose-5-phosphate isomerase rpia | DU508_21380 | Not Available | Positive | 4937251 - 4937931 | 24258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

