Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | DU508_21285 | Not Available | Positive | 4902780 - 4903838 | 39328.7 |
| mfs transporter | DU508_21290 | Not Available | Positive | 4903828 - 4905114 | 47644.7 |
| hypothetical protein | DU508_21295 | Not Available | Positive | 4905436 - 4907151 | 64237.2 |
| insulinase family protein | DU508_21300 | Not Available | Negative | 4907590 - 4910523 | 109520.0 |
| 5'/3'-nucleotidase sure | DU508_21305 | Not Available | Positive | 4910740 - 4911582 | 30751.8 |
| stationary phase survival protein sure | DU508_21310 | Not Available | Positive | 4911593 - 4911865 | 10113.6 |
| lipid-a-disaccharide synthase | DU508_21315 | Not Available | Positive | 4911927 - 4913051 | 42621.0 |
| susc/raga family tonb-linked outer membrane protein | DU508_21320 | Not Available | Positive | 4913317 - 4916352 | 112748.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_21325 | Not Available | Positive | 4916365 - 4918017 | 62096.1 |
| laci family transcriptional regulator | DU508_21330 | Not Available | Positive | 4918220 - 4919221 | 37516.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

