Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain-containing protein | DU508_21235 | Not Available | Negative | 4889772 - 4890185 | 15570.7 |
| hypothetical protein | DU508_21240 | Not Available | Negative | 4890182 - 4890412 | 8774.55 |
| duf4295 domain-containing protein | DU508_21245 | Not Available | Negative | 4890532 - 4890687 | 5550.86 |
| 50s ribosomal protein l33 | DU508_21250 | Not Available | Negative | 4890763 - 4890945 | 7012.72 |
| 50s ribosomal protein l28 | DU508_21255 | Not Available | Negative | 4890989 - 4891222 | 8849.98 |
| acetate--coa ligase | DU508_21260 | Not Available | Positive | 4891438 - 4893333 | 70612.4 |
| csbd family protein | DU508_21265 | Not Available | Positive | 4893507 - 4893692 | 7041.34 |
| hybrid sensor histidine kinase/response regulator | DU508_21270 | Not Available | Positive | 4893877 - 4897977 | 156764.0 |
| tonb-dependent receptor | DU508_21275 | Not Available | Positive | 4898091 - 4901165 | 112378.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_21280 | Not Available | Positive | 4901213 - 4902670 | 54089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

