Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DU508_02040 | Not Available | Negative | 467527 - 468216 | 25905.5 |
| ahpc/tsa family protein | DU508_02045 | Not Available | Negative | 468320 - 469432 | 41544.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | DU508_02050 | Not Available | Negative | 469429 - 470898 | 54163.7 |
| atp-binding protein | DU508_02055 | Not Available | Negative | 471027 - 472214 | 44837.2 |
| hypothetical protein | DU508_02060 | Not Available | Positive | 472382 - 472981 | 22819.1 |
| hypothetical protein | DU508_02065 | Not Available | Positive | 473106 - 473609 | 19542.1 |
| alanine--trna ligase | DU508_02070 | Not Available | Negative | 473868 - 476483 | 98598.2 |
| merr family transcriptional regulator | DU508_02075 | Not Available | Positive | 476599 - 476934 | 13160.0 |
| hypothetical protein | DU508_02080 | Not Available | Positive | 477138 - 477938 | 29330.1 |
| helix-hairpin-helix domain-containing protein | DU508_02085 | Not Available | Positive | 477928 - 479958 | 77336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

