Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DU508_21185 | Not Available | Positive | 4876357 - 4877694 | 50699.8 |
| duf2007 domain-containing protein | DU508_21190 | Not Available | Positive | 4877805 - 4878248 | 16276.3 |
| aconitate hydratase | DU508_21195 | Not Available | Negative | 4878643 - 4880922 | 82103.4 |
| polysaccharide deacetylase family protein | DU508_21200 | Not Available | Negative | 4881331 - 4881981 | 24908.1 |
| tolc family protein | DU508_21205 | Not Available | Positive | 4882056 - 4883411 | 50255.9 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_21210 | Not Available | Positive | 4883577 - 4884911 | 47648.0 |
| glycerol-3-phosphate dehydrogenase | DU508_21215 | Not Available | Positive | 4885049 - 4886029 | 36456.1 |
| hypothetical protein | DU508_21220 | Not Available | Positive | 4886857 - 4887201 | 12262.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DU508_21225 | Not Available | Negative | 4887304 - 4888635 | 50245.4 |
| signal recognition particle-docking protein ftsy | DU508_21230 | Not Available | Negative | 4888810 - 4889772 | 34864.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

