Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | DU508_21135 | Not Available | Positive | 4863073 - 4864134 | 40553.4 |
| purine-nucleoside phosphorylase | DU508_21140 | Not Available | Positive | 4864106 - 4864921 | 30018.8 |
| hypothetical protein | DU508_21145 | Not Available | Positive | 4864959 - 4866920 | 75263.5 |
| port family protein | DU508_21150 | Not Available | Negative | 4866996 - 4867688 | 24057.2 |
| asparagine synthetase b | DU508_21155 | Not Available | Negative | 4867956 - 4869221 | 47805.9 |
| peptidylprolyl isomerase | DU508_21160 | Not Available | Positive | 4869573 - 4870031 | 16673.7 |
| hypothetical protein | DU508_21165 | Not Available | Positive | 4870104 - 4870646 | 19347.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DU508_21170 | Not Available | Negative | 4870886 - 4871359 | 18017.0 |
| dna mismatch repair protein muts | DU508_21175 | Not Available | Positive | 4871404 - 4873218 | 68803.0 |
| pkd domain-containing protein | DU508_21180 | Not Available | Negative | 4873220 - 4875760 | 91944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

