Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_20975 | Not Available | Negative | 4825554 - 4828580 | 109744.0 |
| mosc domain-containing protein | DU508_20980 | Not Available | Positive | 4828901 - 4829713 | 30788.3 |
| arylsulfatase | DU508_20985 | Not Available | Negative | 4829760 - 4831469 | 63641.5 |
| duf2029 domain-containing protein | DU508_20990 | Not Available | Positive | 4832313 - 4833497 | 44956.0 |
| glycosyltransferase | DU508_20995 | Not Available | Positive | 4833494 - 4834426 | 35530.4 |
| duf3473 domain-containing protein | DU508_21000 | Not Available | Positive | 4834426 - 4835205 | 30548.7 |
| peptidase s8 | DU508_21005 | Not Available | Negative | 4835251 - 4837020 | 65977.0 |
| duf1810 family protein | DU508_21020 | Not Available | Negative | 4837784 - 4838017 | 9076.83 |
| response regulator | DU508_21025 | Not Available | Positive | 4838167 - 4838574 | 15468.5 |
| hypothetical protein | DU508_21030 | Not Available | Positive | 4838701 - 4840419 | 65521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

