Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite oxidase | DU508_20925 | Not Available | Negative | 4812445 - 4813641 | 44351.5 |
| pts sugar transporter subunit iibc | DU508_20930 | Not Available | Negative | 4814185 - 4814388 | 7642.32 |
| recombinase family protein | DU508_20935 | Not Available | Negative | 4814406 - 4815860 | 55988.1 |
| hypothetical protein | DU508_20940 | Not Available | Positive | 4816041 - 4817750 | 66271.3 |
| duf1016 domain-containing protein | DU508_20945 | Not Available | Negative | 4818375 - 4819385 | 39644.4 |
| lipoyl(octanoyl) transferase | DU508_20950 | Not Available | Positive | 4820086 - 4820814 | 27818.7 |
| arac family transcriptional regulator | DU508_20955 | Not Available | Negative | 4820785 - 4821621 | 32534.8 |
| quinone oxidoreductase | DU508_20960 | Not Available | Positive | 4821713 - 4822723 | 35878.2 |
| hypothetical protein | DU508_20965 | Not Available | Positive | 4822720 - 4823436 | 27184.5 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_20970 | Not Available | Negative | 4823777 - 4825534 | 64857.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

