Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | DU508_20775 | Not Available | Positive | 4785586 - 4786143 | 20049.1 |
| yeee/yede family protein | DU508_20780 | Not Available | Positive | 4786155 - 4786568 | 15021.0 |
| duf983 domain-containing protein | DU508_20785 | Not Available | Positive | 4786655 - 4786960 | 11720.3 |
| mbl fold metallo-hydrolase | DU508_20790 | Not Available | Positive | 4787083 - 4788423 | 49454.4 |
| cytochrome c | DU508_20795 | Not Available | Positive | 4788529 - 4789515 | 36795.9 |
| hypothetical protein | DU508_20800 | Not Available | Positive | 4789520 - 4789975 | 16873.8 |
| duf202 domain-containing protein | DU508_20805 | Not Available | Positive | 4790316 - 4790705 | 14328.0 |
| response regulator | DU508_20810 | Not Available | Negative | 4790779 - 4791135 | 13255.1 |
| hypothetical protein | DU508_20815 | Not Available | Negative | 4791223 - 4791405 | 7053.3 |
| hypothetical protein | DU508_20820 | Not Available | Negative | 4791437 - 4792003 | 20482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

