Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3347 domain-containing protein | DU508_20725 | Not Available | Negative | 4776669 - 4777241 | 20979.8 |
| duf3347 domain-containing protein | DU508_20730 | Not Available | Negative | 4777359 - 4777847 | 18075.1 |
| hypothetical protein | DU508_20735 | Not Available | Negative | 4777956 - 4778393 | 16175.7 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_20740 | Not Available | Negative | 4778679 - 4779893 | 43602.6 |
| hypothetical protein | DU508_20745 | Not Available | Negative | 4779886 - 4780866 | 36431.8 |
| crp/fnr family transcriptional regulator | DU508_20750 | Not Available | Positive | 4781372 - 4782013 | 24994.7 |
| sulfite exporter taue/safe family protein | DU508_20755 | Not Available | Positive | 4782138 - 4782935 | 27953.9 |
| mbl fold metallo-hydrolase | DU508_20760 | Not Available | Positive | 4783021 - 4784439 | 51706.9 |
| class i sam-dependent methyltransferase | DU508_20765 | Not Available | Positive | 4784447 - 4785067 | 23660.8 |
| rhodanese-like domain-containing protein | DU508_20770 | Not Available | Positive | 4785102 - 4785422 | 11747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

