Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | DU508_20675 | Not Available | Negative | 4758824 - 4760884 | 73275.6 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_20680 | Not Available | Negative | 4761165 - 4762397 | 44208.7 |
| cusa/czca family heavy metal efflux rnd transporter | DU508_20685 | Not Available | Negative | 4762408 - 4766790 | 160478.0 |
| hypothetical protein | DU508_20690 | Not Available | Negative | 4766895 - 4767140 | 8795.51 |
| tonb-dependent receptor | DU508_20695 | Not Available | Negative | 4767635 - 4769815 | 80033.4 |
| hypothetical protein | DU508_20700 | Not Available | Negative | 4769875 - 4770195 | 11627.3 |
| hypothetical protein | DU508_20705 | Not Available | Negative | 4770532 - 4770855 | 12611.2 |
| copper-translocating p-type atpase | DU508_20710 | Not Available | Negative | 4770839 - 4773376 | 90973.0 |
| copper oxidase | DU508_20715 | Not Available | Negative | 4773389 - 4775995 | 99021.3 |
| cytochrome c | DU508_20720 | Not Available | Negative | 4776185 - 4776661 | 18328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

