Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | DU508_20620 | Not Available | Negative | 4745845 - 4748823 | 115505.0 |
| response regulator | DU508_20625 | Not Available | Negative | 4749262 - 4749672 | 15491.8 |
| thiol oxidoreductase | DU508_20630 | Not Available | Positive | 4750709 - 4751911 | 43372.5 |
| rieske (2fe-2s) protein | DU508_20635 | Not Available | Positive | 4751914 - 4752360 | 16559.2 |
| hypothetical protein | DU508_20640 | Not Available | Positive | 4752357 - 4753583 | 45914.1 |
| metal-dependent phosphohydrolase | DU508_20645 | Not Available | Negative | 4753650 - 4754351 | 26791.1 |
| lta synthase family protein | DU508_20650 | Not Available | Negative | 4754359 - 4756308 | 73567.4 |
| hypothetical protein | DU508_20655 | Not Available | Negative | 4756312 - 4756659 | 13096.0 |
| duf1345 domain-containing protein | DU508_20660 | Not Available | Negative | 4756858 - 4757538 | 25352.1 |
| transporter | DU508_20665 | Not Available | Negative | 4757554 - 4758297 | 26497.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

