Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | DU508_20515 | Not Available | Negative | 4722261 - 4722617 | 13580.7 |
| hypothetical protein | DU508_20520 | Not Available | Negative | 4722568 - 4722876 | 11315.4 |
| duf3606 domain-containing protein | DU508_20525 | Not Available | Negative | 4722863 - 4723054 | 6710.67 |
| sos response-associated peptidase | DU508_20530 | Not Available | Negative | 4723153 - 4723974 | 31457.2 |
| hypothetical protein | DU508_20535 | Not Available | Negative | 4723977 - 4724213 | 8950.86 |
| hypothetical protein | DU508_20540 | Not Available | Negative | 4724251 - 4724883 | 23880.5 |
| dna polymerase y family protein | DU508_20550 | Not Available | Positive | 4725879 - 4727387 | 56705.0 |
| error-prone dna polymerase | DU508_20555 | Not Available | Positive | 4727400 - 4730630 | 121922.0 |
| hypothetical protein | DU508_20560 | Not Available | Positive | 4730779 - 4731744 | 37430.8 |
| hypothetical protein | DU508_20565 | Not Available | Positive | 4731731 - 4732336 | 23733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

