Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase | DU508_20315 | Not Available | Negative | 4684380 - 4685864 | 56155.2 |
| vwa domain-containing protein | DU508_20320 | Not Available | Negative | 4686004 - 4687101 | 41486.4 |
| duf1738 domain-containing protein | DU508_20325 | Not Available | Negative | 4688435 - 4688992 | 21100.6 |
| m23 family peptidase | DU508_20330 | Not Available | Negative | 4688985 - 4689623 | 23702.7 |
| hypothetical protein | DU508_20335 | Not Available | Negative | 4689592 - 4690014 | 15561.7 |
| type iv secretory system conjugative dna transfer family protein | DU508_20340 | Not Available | Negative | 4690051 - 4692093 | 76196.6 |
| duf4138 domain-containing protein | DU508_20345 | Not Available | Negative | 4692103 - 4692942 | 30994.5 |
| conjugative transposon protein tram | DU508_20350 | Not Available | Negative | 4692949 - 4694175 | 45463.6 |
| hypothetical protein | DU508_20355 | Not Available | Negative | 4694185 - 4694571 | 14371.0 |
| conjugative transposon protein trak | DU508_20360 | Not Available | Negative | 4694568 - 4695191 | 23747.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

