Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | DU508_20265 | Not Available | Positive | 4672154 - 4673200 | 38278.7 |
| d-tyrosyl-trna(tyr) deacylase | DU508_20270 | Not Available | Positive | 4673361 - 4673813 | 16331.0 |
| glycosyl transferase | DU508_20275 | Not Available | Positive | 4674038 - 4675579 | 59298.1 |
| pyrophosphatase | DU508_20280 | Not Available | Positive | 4675569 - 4675895 | 12366.8 |
| duf4286 family protein | DU508_20285 | Not Available | Negative | 4675926 - 4676228 | 11744.1 |
| hypothetical protein | DU508_20290 | Not Available | Negative | 4676288 - 4678111 | 69486.3 |
| s9 family peptidase | DU508_20295 | Not Available | Positive | 4678378 - 4680264 | 71843.8 |
| sensor histidine kinase | DU508_20300 | Not Available | Positive | 4680268 - 4681935 | 63496.2 |
| dna-binding response regulator | DU508_20305 | Not Available | Positive | 4682234 - 4682923 | 26405.1 |
| metallophosphoesterase | DU508_20310 | Not Available | Negative | 4683020 - 4684282 | 47724.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

