Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DU508_20210 | Not Available | Positive | 4660365 - 4662341 | 73606.2 |
| adenine deaminase | DU508_20215 | Not Available | Positive | 4662456 - 4664093 | 60340.1 |
| duf433 domain-containing protein | DU508_20225 | Not Available | Negative | 4664440 - 4664676 | 8778.81 |
| sprt domain-containing protein | DU508_20230 | Not Available | Negative | 4664715 - 4665323 | 24026.0 |
| gxxexxy protein | DU508_20235 | Not Available | Negative | 4665370 - 4665747 | 14074.7 |
| helicase | DU508_20240 | Not Available | Negative | 4665831 - 4668098 | 86328.1 |
| peptide chain release factor 3 | DU508_20245 | Not Available | Positive | 4668883 - 4670466 | 59992.3 |
| hypothetical protein | DU508_20250 | Not Available | Positive | 4670520 - 4670888 | 13243.4 |
| thioredoxin family protein | DU508_20255 | Not Available | Positive | 4670989 - 4671594 | 22678.4 |
| atp-dependent clp protease adaptor clps | DU508_20260 | Not Available | Negative | 4671737 - 4672018 | 10952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

