Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DU508_01930 | Not Available | Positive | 448467 - 449657 | 43695.8 |
| gxxexxy protein | DU508_01935 | Not Available | Positive | 449786 - 450172 | 14613.0 |
| atpase | DU508_01940 | Not Available | Positive | 450514 - 450891 | 14622.9 |
| hypothetical protein | DU508_01945 | Not Available | Positive | 450970 - 451773 | 29684.1 |
| hypothetical protein | DU508_01950 | Not Available | Positive | 451823 - 452041 | 7784.77 |
| diaminopimelate decarboxylase | DU508_01955 | Not Available | Negative | 452119 - 453291 | 43862.3 |
| 2-oxoisovalerate dehydrogenase | DU508_01965 | Not Available | Negative | 453865 - 454071 | 7772.38 |
| aspartate kinase | DU508_01970 | Not Available | Negative | 454091 - 455404 | 48583.5 |
| phospho-sugar mutase | DU508_01975 | Not Available | Positive | 455662 - 457398 | 63737.4 |
| hypothetical protein | DU508_01980 | Not Available | Positive | 457642 - 457971 | 13103.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

